R/get_slurm_out.R
get_slurm_out.RdThis function reads all function output files (one by cluster node used) from
the specified Slurm job and returns the result in a single data frame
(if "table" format selected) or list (if "raw" format selected). It doesn't
record any messages (including warnings or errors) output to the R console
during the computation; these can be consulted by invoking
print_job_status.
get_slurm_out(slr_job, outtype = "raw", wait = TRUE, ncores = NULL)A slurm_job object.
Can be "table" or "raw", see "Value" below for details.
Specify whether to block until slr_job completes.
(optional) If not null, the number of cores passed to mclapply
If outtype = "table": A data frame with one column by
return value of the function passed to slurm_apply, where
each row is the output of the corresponding row in the params data frame
passed to slurm_apply.
If outtype = "raw": A list where each element is the output
of the function passed to slurm_apply for the corresponding
row in the params data frame passed to slurm_apply.
The outtype option is only relevant for jobs submitted with
slurm_apply. Jobs sent with slurm_call only return a single
object, and setting outtype = "table" creates an error in that case.